Enter motif set #1 (Sample)Position-specific weight matrix (PWM) or Position-specific frequency matrix (PFM) in tab-delimited format.
Example:
Motif PITX1
Pos A C G T
1 0.19 0.27 0.11 0.43
2 0.05 0.01 0.00 0.94
3 0.88 0.04 0.06 0.01
4 0.99 0.00 0.00 0.01
5 0.02 0.02 0.13 0.84
6 0.06 0.86 0.01 0.07
7 0.04 0.77 0.03 0.15
8 0.23 0.41 0.14 0.22
The separating character between words must be
Or upload motif set #1

Compare it against database motifsMotif set #1 will be compared to a pre-compiled list od DNA or RNA motifs from CIS-BP and CIS-BP-RNA using default parameters

Enter motif set #2 (Sample)Position-specific weight matrix (PWM) or Position-specific frequency matrix (PFM) in tab-delimited format.
Example:
Motif PITX1
Pos A C G T
1 0.19 0.27 0.11 0.43
2 0.05 0.01 0.00 0.94
3 0.88 0.04 0.06 0.01
4 0.99 0.00 0.00 0.01
5 0.02 0.02 0.13 0.84
6 0.06 0.86 0.01 0.07
7 0.04 0.77 0.03 0.15
8 0.23 0.41 0.14 0.22
The separating character between words must be
Or upload motif set #2

Motif type DNA
RNA

Sequence length
Sequence count